Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.06■□□□□ 0.32
GAP43P17677 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.06■□□□□ 0.32
GAP43P17677 AC093813.1-201ENST00000605066 256 ntBASIC17.06■□□□□ 0.32
GAP43P17677 MIR8072-201ENST00000614241 80 ntBASIC17.06■□□□□ 0.32
GAP43P17677 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GAP43P17677 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GAP43P17677 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GAP43P17677 MST1L-201ENST00000442552 2185 ntBASIC17.06■□□□□ 0.32
GAP43P17677 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GAP43P17677 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GAP43P17677 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
GAP43P17677 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.06■□□□□ 0.32
GAP43P17677 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.06■□□□□ 0.32
GAP43P17677 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.06■□□□□ 0.32
GAP43P17677 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GAP43P17677 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.05■□□□□ 0.32
GAP43P17677 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.05■□□□□ 0.32
GAP43P17677 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GAP43P17677 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 INTS4P2-202ENST00000614726 2019 ntBASIC17.05■□□□□ 0.32
GAP43P17677 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GAP43P17677 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 AC134915.1-201ENST00000426461 574 ntBASIC17.05■□□□□ 0.32
GAP43P17677 AL442647.2-201ENST00000429864 857 ntBASIC17.05■□□□□ 0.32
GAP43P17677 AC092552.1-201ENST00000547243 906 ntBASIC17.05■□□□□ 0.32
GAP43P17677 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 CHCHD2P3-201ENST00000603038 451 ntBASIC17.05■□□□□ 0.32
GAP43P17677 TMEM261P1-201ENST00000604899 340 ntBASIC17.05■□□□□ 0.32
GAP43P17677 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.05■□□□□ 0.32
GAP43P17677 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.05■□□□□ 0.32
GAP43P17677 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAP43P17677 AC144831.1-201ENST00000573312 2656 ntBASIC17.04■□□□□ 0.32
GAP43P17677 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.04■□□□□ 0.32
GAP43P17677 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GAP43P17677 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.04■□□□□ 0.32
GAP43P17677 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GAP43P17677 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
GAP43P17677 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.04■□□□□ 0.32
GAP43P17677 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.04■□□□□ 0.32
GAP43P17677 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
GAP43P17677 AC120045.2-201ENST00000567334 178 ntBASIC17.04■□□□□ 0.32
GAP43P17677 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.04■□□□□ 0.32
GAP43P17677 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.04■□□□□ 0.32
GAP43P17677 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.04■□□□□ 0.32
GAP43P17677 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.04■□□□□ 0.32
GAP43P17677 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.04■□□□□ 0.32
GAP43P17677 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.04■□□□□ 0.32
GAP43P17677 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.04■□□□□ 0.32
GAP43P17677 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GAP43P17677 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.04■□□□□ 0.32
GAP43P17677 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.04■□□□□ 0.32
GAP43P17677 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 AL138799.1-201ENST00000448213 1675 ntBASIC17.04■□□□□ 0.32
GAP43P17677 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.04■□□□□ 0.32
GAP43P17677 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GAP43P17677 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAP43P17677 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms