Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CLUP10909 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.06□□□□□ -0.16
CLUP10909 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLUP10909 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLUP10909 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLUP10909 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLUP10909 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.05□□□□□ -0.16
CLUP10909 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 AC139749.1-202ENST00000617529 3139 ntBASIC14.05□□□□□ -0.16
CLUP10909 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLUP10909 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLUP10909 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CLUP10909 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.05□□□□□ -0.16
CLUP10909 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CLUP10909 MCCD1P2-201ENST00000423228 335 ntBASIC14.05□□□□□ -0.16
CLUP10909 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.05□□□□□ -0.16
CLUP10909 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.05□□□□□ -0.16
CLUP10909 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.05□□□□□ -0.16
CLUP10909 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.05□□□□□ -0.16
CLUP10909 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CLUP10909 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLUP10909 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.05□□□□□ -0.16
CLUP10909 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLUP10909 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLUP10909 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLUP10909 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CLUP10909 AC007292.2-201ENST00000593524 1812 ntBASIC14.04□□□□□ -0.16
CLUP10909 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CLUP10909 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.04□□□□□ -0.16
CLUP10909 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CLUP10909 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLUP10909 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 AC136604.1-201ENST00000418535 575 ntBASIC14.04□□□□□ -0.16
CLUP10909 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.04□□□□□ -0.16
CLUP10909 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.04□□□□□ -0.16
CLUP10909 ALG1L5P-201ENST00000482043 771 ntBASIC14.04□□□□□ -0.16
CLUP10909 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.04□□□□□ -0.16
CLUP10909 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.04□□□□□ -0.16
CLUP10909 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 AC040169.1-201ENST00000565382 521 ntBASIC14.04□□□□□ -0.16
CLUP10909 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.04□□□□□ -0.16
CLUP10909 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CLUP10909 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms