Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.64■□□□□ 0.1
RETP07949 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.64■□□□□ 0.09
RETP07949 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.64■□□□□ 0.09
RETP07949 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.64■□□□□ 0.09
RETP07949 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.64■□□□□ 0.09
RETP07949 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RETP07949 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.64■□□□□ 0.09
RETP07949 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.64■□□□□ 0.09
RETP07949 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.64■□□□□ 0.09
RETP07949 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RETP07949 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.64■□□□□ 0.09
RETP07949 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RETP07949 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.64■□□□□ 0.09
RETP07949 AC074338.1-201ENST00000416825 156 ntBASIC15.64■□□□□ 0.09
RETP07949 TARDBPP1-201ENST00000442013 1203 ntBASIC15.64■□□□□ 0.09
RETP07949 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.64■□□□□ 0.09
RETP07949 RN7SL769P-201ENST00000469386 295 ntBASIC15.64■□□□□ 0.09
RETP07949 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 MIR4706-201ENST00000582134 82 ntBASIC15.64■□□□□ 0.09
RETP07949 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.64■□□□□ 0.09
RETP07949 AC005695.3-201ENST00000614522 232 ntBASIC15.64■□□□□ 0.09
RETP07949 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.64■□□□□ 0.09
RETP07949 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RETP07949 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 AP005117.1-202ENST00000581724 1908 ntBASIC15.64■□□□□ 0.09
RETP07949 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.64■□□□□ 0.09
RETP07949 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.64■□□□□ 0.09
RETP07949 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RETP07949 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RETP07949 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.63■□□□□ 0.09
RETP07949 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.63■□□□□ 0.09
RETP07949 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.63■□□□□ 0.09
RETP07949 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RETP07949 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.63■□□□□ 0.09
RETP07949 LDHBP1-201ENST00000455730 1119 ntBASIC15.63■□□□□ 0.09
RETP07949 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.63■□□□□ 0.09
RETP07949 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.63■□□□□ 0.09
RETP07949 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.63■□□□□ 0.09
RETP07949 AC025279.2-201ENST00000569730 653 ntBASIC15.63■□□□□ 0.09
RETP07949 AC104982.3-201ENST00000581995 514 ntBASIC15.63■□□□□ 0.09
RETP07949 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RETP07949 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.63■□□□□ 0.09
RETP07949 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 KRT8P19-201ENST00000551916 1455 ntBASIC15.63■□□□□ 0.09
RETP07949 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RETP07949 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RETP07949 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
RETP07949 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.63■□□□□ 0.09
RETP07949 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RETP07949 AC022532.1-201ENST00000624563 1728 ntBASIC15.63■□□□□ 0.09
RETP07949 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RETP07949 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.62■□□□□ 0.09
RETP07949 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.62■□□□□ 0.09
RETP07949 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RETP07949 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.62■□□□□ 0.09
RETP07949 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.62■□□□□ 0.09
RETP07949 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms