Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 AC104457.1-201ENST00000401024 814 ntBASIC15.69■□□□□ 0.1
HLA-DQB2P05538 AC123567.1-201ENST00000548294 1261 ntBASIC15.69■□□□□ 0.1
HLA-DQB2P05538 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 AL359258.3-201ENST00000622910 2331 ntBASIC15.69■□□□□ 0.1
HLA-DQB2P05538 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 TNRC18P2-201ENST00000417666 2714 ntBASIC15.69■□□□□ 0.1
HLA-DQB2P05538 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DQB2P05538 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 REXO1L4P-201ENST00000605109 1937 ntBASIC15.68■□□□□ 0.1
HLA-DQB2P05538 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AC006058.4-201ENST00000624016 1670 ntBASIC15.68■□□□□ 0.1
HLA-DQB2P05538 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AC026410.3-201ENST00000514280 936 ntBASIC15.68■□□□□ 0.1
HLA-DQB2P05538 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AC190387.1-201ENST00000551683 408 ntBASIC15.68■□□□□ 0.1
HLA-DQB2P05538 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AC007431.3-201ENST00000623221 587 ntBASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AP000845.1-201ENST00000581677 2131 ntBASIC15.68■□□□□ 0.1
HLA-DQB2P05538 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms