Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.67□□□□□ -0.06
SNX4O95219 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SNX4O95219 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SNX4O95219 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.67□□□□□ -0.06
SNX4O95219 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX4O95219 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX4O95219 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX4O95219 RN7SL618P-201ENST00000477850 296 ntBASIC14.67□□□□□ -0.06
SNX4O95219 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SNX4O95219 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.67□□□□□ -0.06
SNX4O95219 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.67□□□□□ -0.06
SNX4O95219 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.67□□□□□ -0.06
SNX4O95219 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SNX4O95219 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 AP003680.1-201ENST00000598970 3660 ntBASIC14.67□□□□□ -0.06
SNX4O95219 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.67□□□□□ -0.06
SNX4O95219 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.67□□□□□ -0.06
SNX4O95219 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 AC106881.1-201ENST00000605849 3329 ntBASIC14.67□□□□□ -0.06
SNX4O95219 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SNX4O95219 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SNX4O95219 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.67□□□□□ -0.06
SNX4O95219 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX4O95219 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX4O95219 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SNX4O95219 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.66□□□□□ -0.06
SNX4O95219 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SNX4O95219 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
SNX4O95219 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SNX4O95219 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 AC022144.1-201ENST00000602255 1580 ntBASIC14.66□□□□□ -0.06
SNX4O95219 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SNX4O95219 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.66□□□□□ -0.06
SNX4O95219 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.66□□□□□ -0.06
SNX4O95219 ZNF890P-202ENST00000530367 1156 ntBASIC14.66□□□□□ -0.06
SNX4O95219 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.66□□□□□ -0.06
SNX4O95219 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.66□□□□□ -0.06
SNX4O95219 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.66□□□□□ -0.06
SNX4O95219 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
SNX4O95219 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 AL033527.5-202ENST00000641632 1098 ntBASIC14.66□□□□□ -0.06
SNX4O95219 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SNX4O95219 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.66□□□□□ -0.06
SNX4O95219 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SNX4O95219 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SNX4O95219 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SNX4O95219 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SNX4O95219 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SNX4O95219 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX4O95219 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX4O95219 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
SNX4O95219 AC020658.6-201ENST00000623564 1870 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms