Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TSPAN4O14817 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.17□□□□□ -0.3
TSPAN4O14817 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.17□□□□□ -0.3
TSPAN4O14817 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TSPAN4O14817 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 UNC93B7-201ENST00000509439 705 ntBASIC13.17□□□□□ -0.3
TSPAN4O14817 STK19B-204ENST00000512515 211 ntBASIC13.17□□□□□ -0.3
TSPAN4O14817 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.17□□□□□ -0.3
TSPAN4O14817 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 AP001269.4-201ENST00000609611 512 ntBASIC13.17□□□□□ -0.3
TSPAN4O14817 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 AL355877.3-201ENST00000622820 899 ntBASIC13.17□□□□□ -0.3
TSPAN4O14817 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
TSPAN4O14817 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.17□□□□□ -0.3
TSPAN4O14817 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.17□□□□□ -0.3
TSPAN4O14817 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TSPAN4O14817 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TSPAN4O14817 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TSPAN4O14817 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.17□□□□□ -0.3
TSPAN4O14817 INTS4P1-203ENST00000641008 3683 ntBASIC13.17□□□□□ -0.3
TSPAN4O14817 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TSPAN4O14817 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.17□□□□□ -0.3
TSPAN4O14817 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.16□□□□□ -0.3
TSPAN4O14817 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.16□□□□□ -0.3
TSPAN4O14817 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.16□□□□□ -0.3
TSPAN4O14817 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TSPAN4O14817 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TSPAN4O14817 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.16□□□□□ -0.3
TSPAN4O14817 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 MROH4P-201ENST00000431302 1578 ntBASIC13.16□□□□□ -0.3
TSPAN4O14817 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TSPAN4O14817 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.16□□□□□ -0.3
TSPAN4O14817 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 SIGLEC16-201ENST00000599858 1437 ntBASIC13.16□□□□□ -0.3
TSPAN4O14817 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.16□□□□□ -0.3
TSPAN4O14817 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
TSPAN4O14817 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.16□□□□□ -0.3
TSPAN4O14817 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.16□□□□□ -0.3
TSPAN4O14817 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 AL020989.1-201ENST00000422979 469 ntBASIC13.16□□□□□ -0.3
TSPAN4O14817 TPM4P1-201ENST00000436100 807 ntBASIC13.16□□□□□ -0.3
TSPAN4O14817 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.16□□□□□ -0.3
TSPAN4O14817 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.16□□□□□ -0.3
TSPAN4O14817 SCARNA2-201ENST00000458748 420 ntBASIC13.16□□□□□ -0.3
TSPAN4O14817 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.16□□□□□ -0.3
TSPAN4O14817 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TSPAN4O14817 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.16□□□□□ -0.3
TSPAN4O14817 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.16□□□□□ -0.3
TSPAN4O14817 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.16□□□□□ -0.3
TSPAN4O14817 MTDHP3-201ENST00000594186 672 ntBASIC13.16□□□□□ -0.3
TSPAN4O14817 AC008608.2-201ENST00000606089 416 ntBASIC13.16□□□□□ -0.3
TSPAN4O14817 AL139288.1-201ENST00000623748 933 ntBASIC13.16□□□□□ -0.3
TSPAN4O14817 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms