Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
UPK2O00526 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 RPSAP43-201ENST00000402237 625 ntBASIC12.48□□□□□ -0.41
UPK2O00526 UPF3AP3-201ENST00000420996 769 ntBASIC12.48□□□□□ -0.41
UPK2O00526 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.48□□□□□ -0.41
UPK2O00526 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.48□□□□□ -0.41
UPK2O00526 AC011467.4-201ENST00000594891 528 ntBASIC12.48□□□□□ -0.41
UPK2O00526 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UPK2O00526 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 AL365209.1-201ENST00000624418 6473 ntBASIC12.48□□□□□ -0.41
UPK2O00526 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UPK2O00526 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
UPK2O00526 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK2O00526 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK2O00526 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.48□□□□□ -0.41
UPK2O00526 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
UPK2O00526 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
UPK2O00526 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UPK2O00526 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UPK2O00526 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.47□□□□□ -0.41
UPK2O00526 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 AL133267.1-201ENST00000398220 340 ntBASIC12.47□□□□□ -0.41
UPK2O00526 AC211486.1-202ENST00000416371 468 ntBASIC12.47□□□□□ -0.41
UPK2O00526 AL080243.2-201ENST00000418783 582 ntBASIC12.47□□□□□ -0.41
UPK2O00526 BX842568.4-201ENST00000421222 227 ntBASIC12.47□□□□□ -0.41
UPK2O00526 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.47□□□□□ -0.41
UPK2O00526 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.47□□□□□ -0.41
UPK2O00526 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
UPK2O00526 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.47□□□□□ -0.41
UPK2O00526 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.47□□□□□ -0.41
UPK2O00526 AC211476.1-201ENST00000503899 468 ntBASIC12.47□□□□□ -0.41
UPK2O00526 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.47□□□□□ -0.41
UPK2O00526 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.47□□□□□ -0.41
UPK2O00526 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.47□□□□□ -0.41
UPK2O00526 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.47□□□□□ -0.41
UPK2O00526 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.47□□□□□ -0.41
UPK2O00526 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 AL033527.5-202ENST00000641632 1098 ntBASIC12.47□□□□□ -0.41
UPK2O00526 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.47□□□□□ -0.41
UPK2O00526 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.47□□□□□ -0.41
UPK2O00526 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.47□□□□□ -0.41
UPK2O00526 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.47□□□□□ -0.41
UPK2O00526 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
UPK2O00526 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.47□□□□□ -0.41
UPK2O00526 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.47□□□□□ -0.41
UPK2O00526 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.47□□□□□ -0.41
UPK2O00526 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.47□□□□□ -0.41
UPK2O00526 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK2O00526 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UPK2O00526 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UPK2O00526 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
UPK2O00526 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.46□□□□□ -0.41
UPK2O00526 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
UPK2O00526 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.46□□□□□ -0.41
UPK2O00526 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UPK2O00526 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.46□□□□□ -0.41
UPK2O00526 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UPK2O00526 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UPK2O00526 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms