Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC023310.3-201ENST00000557027 670 ntBASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC100756.1-201ENST00000562736 682 ntBASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC138749.3-201ENST00000567691 622 ntBASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC140912.1-201ENST00000577171 1054 ntBASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AC116165.1-201ENST00000611806 668 ntBASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 AL645728.2-202ENST00000641679 227 ntBASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM9A6NGZ8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 AC127383.1-201ENST00000444697 1800 ntBASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 KRT18P64-201ENST00000434946 1219 ntBASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 GNAQP1-201ENST00000444815 1067 ntBASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 FAM86LP-201ENST00000478302 853 ntBASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 SPDYE18-201ENST00000510091 1050 ntBASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 TMEM261P1-201ENST00000604899 340 ntBASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM9A6NGZ8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms