Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL161645.1-201ENST00000622716 1255 ntBASIC16.93■□□□□ 0.3
CCDC66A2RUB6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 BCAR1-209ENST00000546196 1340 ntBASIC16.93■□□□□ 0.3
CCDC66A2RUB6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
CCDC66A2RUB6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 AC004877.2-201ENST00000623941 599 ntBASIC16.92■□□□□ 0.3
CCDC66A2RUB6 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC66A2RUB6 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 GPX1P2-201ENST00000429271 606 ntBASIC16.91■□□□□ 0.3
CCDC66A2RUB6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC66A2RUB6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms