Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI2Q9Y5P3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AC112693.3-201ENST00000624819 1983 ntBASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AC073347.1-201ENST00000421633 2643 ntBASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AP006294.1-201ENST00000415407 339 ntBASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AC098850.1-201ENST00000419919 790 ntBASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 MYCLP2-201ENST00000449268 967 ntBASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 MIR4259-201ENST00000584466 101 ntBASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 AC008494.3-201ENST00000606615 944 ntBASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 C18orf15-201ENST00000623680 2534 ntBASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI2Q9Y5P3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 AL049840.4-201ENST00000602422 811 ntBASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms