Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
LINC00588Q9Y4M8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AL136379.1-201ENST00000623471 2642 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AL365203.3-201ENST00000609742 2057 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AC022188.1-201ENST00000620960 1664 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 KLF2P4-201ENST00000451959 1225 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 CTBP2P5-201ENST00000454986 1264 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AC106760.1-201ENST00000508690 800 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 KRT18P25-201ENST00000508931 1278 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 MIR4259-201ENST00000584466 101 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 Six3os1_5.1-201ENST00000611000 271 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AP005019.2-201ENST00000615104 511 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 COX11-210ENST00000639671 696 ntBASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00588Q9Y4M8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms