Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1Q9Y2A7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1Q9Y2A7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1Q9Y2A7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1Q9Y2A7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 LINC02199-201ENST00000506655 2702 ntBASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 TUBB1P2-201ENST00000422712 1306 ntBASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 TUBB1P1-201ENST00000503144 1300 ntBASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 NUS1P3-201ENST00000423502 862 ntBASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 ACTBP11-201ENST00000436287 1126 ntBASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 GAPDHP40-201ENST00000505218 1006 ntBASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AC023310.1-201ENST00000554836 735 ntBASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 AC244669.2-201ENST00000612320 853 ntBASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.54■□□□□ 0.08
NCKAP1Q9Y2A7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 AC022494.1-201ENST00000466044 728 ntBASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 FAM8A2P-201ENST00000528813 1142 ntBASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 KRT90P-201ENST00000549264 1064 ntBASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1Q9Y2A7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NCKAP1Q9Y2A7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCKAP1Q9Y2A7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCKAP1Q9Y2A7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCKAP1Q9Y2A7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
NCKAP1Q9Y2A7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCKAP1Q9Y2A7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.52■□□□□ 0.08
NCKAP1Q9Y2A7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NCKAP1Q9Y2A7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCKAP1Q9Y2A7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms