Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 FAM220CP-201ENST00000395253 831 ntBASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
UBQLN2Q9UHD9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.21□□□□□ -0.3
UBQLN2Q9UHD9 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
UBQLN2Q9UHD9 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
UBQLN2Q9UHD9 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBQLN2Q9UHD9 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.21□□□□□ -0.3
UBQLN2Q9UHD9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.21□□□□□ -0.3
UBQLN2Q9UHD9 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
UBQLN2Q9UHD9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBQLN2Q9UHD9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 AC152010.1-201ENST00000415779 2006 ntBASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 EMBP1-201ENST00000458200 901 ntBASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 AC011467.2-201ENST00000598425 242 ntBASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 AC009336.1-201ENST00000608941 1553 ntBASIC13.2□□□□□ -0.3
UBQLN2Q9UHD9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms