Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRFN1Q9P244 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRFN1Q9P244 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRFN1Q9P244 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LRFN1Q9P244 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRFN1Q9P244 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 AC134312.5-201ENST00000568031 1313 ntBASIC14.26□□□□□ -0.13
LRFN1Q9P244 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 KRT223P-202ENST00000449164 1292 ntBASIC14.26□□□□□ -0.13
LRFN1Q9P244 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 COX11-210ENST00000639671 696 ntBASIC14.26□□□□□ -0.13
LRFN1Q9P244 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRFN1Q9P244 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LRFN1Q9P244 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 HYMAI-201ENST00000635591 3347 ntBASIC14.25□□□□□ -0.13
LRFN1Q9P244 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 LINC02199-201ENST00000506655 2702 ntBASIC14.25□□□□□ -0.13
LRFN1Q9P244 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 AC103702.1-201ENST00000548801 2630 ntBASIC14.25□□□□□ -0.13
LRFN1Q9P244 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 AC093433.1-201ENST00000458048 571 ntBASIC14.25□□□□□ -0.13
LRFN1Q9P244 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 AP001889.1-201ENST00000525414 633 ntBASIC14.25□□□□□ -0.13
LRFN1Q9P244 AP001582.1-201ENST00000525856 295 ntBASIC14.25□□□□□ -0.13
LRFN1Q9P244 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 SNX29P1-201ENST00000548357 1007 ntBASIC14.25□□□□□ -0.13
LRFN1Q9P244 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LRFN1Q9P244 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRFN1Q9P244 AC010491.1-201ENST00000563101 2797 ntBASIC14.25□□□□□ -0.13
LRFN1Q9P244 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms