Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 AC004840.1-201ENST00000636359 365 ntBASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 PRAL-201ENST00000624952 3286 ntBASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PARPBPQ9NWS1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 DBET-201ENST00000630918 3363 ntBASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 TERF1P3-201ENST00000505638 1227 ntBASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 AC093004.1-201ENST00000508850 424 ntBASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 LINC02560-201ENST00000596379 459 ntBASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 AC008761.3-201ENST00000624803 892 ntBASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PARPBPQ9NWS1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.96□□□□□ -0.18
PARPBPQ9NWS1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
PARPBPQ9NWS1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PARPBPQ9NWS1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
PARPBPQ9NWS1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
PARPBPQ9NWS1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
PARPBPQ9NWS1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
PARPBPQ9NWS1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PARPBPQ9NWS1 AL391825.1-201ENST00000457671 1364 ntBASIC13.96□□□□□ -0.18
PARPBPQ9NWS1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 AC087499.6-201ENST00000411576 835 ntBASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 UGT1A2P-201ENST00000454886 866 ntBASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 TPRX2P-201ENST00000535362 881 ntBASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms