Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 WASH3P-207ENST00000560956 1394 ntBASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 FO538757.1-201ENST00000623083 1397 ntBASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 AC117489.1-201ENST00000625169 3217 ntBASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 BX640514.1-201ENST00000583223 1918 ntBASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 AC023141.5-201ENST00000458585 616 ntBASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 AC093214.1-201ENST00000511688 1107 ntBASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 AC109635.5-201ENST00000533593 962 ntBASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 AC093520.2-201ENST00000561830 333 ntBASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 AJ011932.1-201ENST00000621707 465 ntBASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 AC092902.6-201ENST00000641783 218 ntBASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCM2LQ9NUG4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCM2LQ9NUG4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CCM2LQ9NUG4 AL161772.1-201ENST00000610494 4412 ntBASIC14.83□□□□□ -0.03
CCM2LQ9NUG4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.83□□□□□ -0.03
CCM2LQ9NUG4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCM2LQ9NUG4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCM2LQ9NUG4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 CXCL1P1-201ENST00000502804 216 ntBASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms