Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 UPF3AP3-201ENST00000420996 769 ntBASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 FAM58DP-201ENST00000428076 619 ntBASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 PTENP1-202ENST00000532280 3996 ntBASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 KRT18P32-201ENST00000424695 1287 ntBASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 RPS8P6-201ENST00000426177 609 ntBASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 AC092865.5-201ENST00000545435 363 ntBASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 AC093520.2-201ENST00000561830 333 ntBASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 RARRES2P9-201ENST00000565168 469 ntBASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 AC055717.3-201ENST00000622967 595 ntBASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 AC136621.1-201ENST00000624017 2304 ntBASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHRDL1Q9BU40 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 SNX18-202ENST00000343017 3140 ntBASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms