Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC007686.3-201ENST00000619017 3487 ntBASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC007191.1-201ENST00000623179 2995 ntBASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 ACE3P-201ENST00000423435 1973 ntBASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 KRT18P32-201ENST00000424695 1287 ntBASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 TARDBPP1-201ENST00000442013 1203 ntBASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC022145.2-201ENST00000598203 171 ntBASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC105339.1-204ENST00000636249 355 ntBASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SHANK2-AS3Q9BTD1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms