Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CD164-210ENST00000512821 964 ntTSL 2 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 ACY3-202ENST00000529256 933 ntTSL 3 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 NME2-201ENST00000393183 568 ntTSL 2 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AL138902.1-201ENST00000437965 856 ntTSL 3 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC133141.1-201ENST00000443015 339 ntBASIC4.54□□□□□ -1.68
HMCN1Q96RW7 SNRPD2P2-201ENST00000473818 333 ntBASIC4.54□□□□□ -1.68
HMCN1Q96RW7 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC048382.6-201ENST00000621980 1223 ntBASIC4.54□□□□□ -1.68
HMCN1Q96RW7 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 TNXA-203ENST00000507684 2038 ntBASIC4.54□□□□□ -1.68
HMCN1Q96RW7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 AP000593.2-201ENST00000542775 1433 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 WDR54-202ENST00000409791 854 ntTSL 3 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 AC000077.1-201ENST00000420012 953 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 PEBP1P3-201ENST00000455475 548 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 ALDOAP1-201ENST00000491506 1078 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 AC073869.4-201ENST00000620841 800 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 ST5-261ENST00000626808 1071 ntTSL 5 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 AL603764.1-201ENST00000636452 321 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 PCGF3-213ENST00000620529 1899 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 U3.41-201ENST00000408711 219 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 FURIN-208ENST00000640725 224 ntTSL 5 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 FKBP4P6-201ENST00000457486 1332 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 AIRN-201ENST00000601203 4374 ntBASIC4.53□□□□□ -1.68
HMCN1Q96RW7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC4.53□□□□□ -1.68
HMCN1Q96RW7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms