Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS33AQ96AX1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 AZGP1P1-201ENST00000411909 902 ntBASIC14.98□□□□□ -0.01
VPS33AQ96AX1 ADH5P3-201ENST00000433842 1137 ntBASIC14.98□□□□□ -0.01
VPS33AQ96AX1 TPM4P1-201ENST00000436100 807 ntBASIC14.98□□□□□ -0.01
VPS33AQ96AX1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 RN7SL589P-201ENST00000481268 310 ntBASIC14.98□□□□□ -0.01
VPS33AQ96AX1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 FAM86C2P-203ENST00000528684 1004 ntBASIC14.98□□□□□ -0.01
VPS33AQ96AX1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 LINC01225-203ENST00000563550 1244 ntBASIC14.98□□□□□ -0.01
VPS33AQ96AX1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 CICP14-201ENST00000629111 2732 ntBASIC14.98□□□□□ -0.01
VPS33AQ96AX1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS33AQ96AX1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 FAM58CP-201ENST00000435741 640 ntBASIC14.97□□□□□ -0.01
VPS33AQ96AX1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 KRT8P48-201ENST00000515599 1220 ntBASIC14.97□□□□□ -0.01
VPS33AQ96AX1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 AC140113.2-201ENST00000604370 208 ntBASIC14.97□□□□□ -0.01
VPS33AQ96AX1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 ZNF259P1-201ENST00000407656 1365 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms