Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBA3Q8TBC4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 TP53TG3HP-202ENST00000569755 579 ntBASIC16.42■□□□□ 0.22
UBA3Q8TBC4 CTBP2P3-201ENST00000585629 1255 ntBASIC16.42■□□□□ 0.22
UBA3Q8TBC4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 AL109954.1-202ENST00000564051 2148 ntBASIC16.42■□□□□ 0.22
UBA3Q8TBC4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBA3Q8TBC4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 DGCR5-201ENST00000399539 862 ntBASIC16.41■□□□□ 0.22
UBA3Q8TBC4 RPL5P21-201ENST00000404620 815 ntBASIC16.41■□□□□ 0.22
UBA3Q8TBC4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 ELK1P1-201ENST00000485699 580 ntBASIC16.41■□□□□ 0.22
UBA3Q8TBC4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AC092552.1-201ENST00000547243 906 ntBASIC16.41■□□□□ 0.22
UBA3Q8TBC4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AC140912.1-201ENST00000577171 1054 ntBASIC16.41■□□□□ 0.22
UBA3Q8TBC4 SPDYE22P-201ENST00000582158 798 ntBASIC16.41■□□□□ 0.22
UBA3Q8TBC4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBA3Q8TBC4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms