Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 AC004066.1-201ENST00000502488 802 ntBASIC16.55■□□□□ 0.24
LMO3Q8TAP4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 AC055876.2-201ENST00000531834 546 ntBASIC16.55■□□□□ 0.24
LMO3Q8TAP4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 RN7SL204P-201ENST00000582831 262 ntBASIC16.55■□□□□ 0.24
LMO3Q8TAP4 CHCHD2P3-201ENST00000603038 451 ntBASIC16.55■□□□□ 0.24
LMO3Q8TAP4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 AL157414.3-201ENST00000624276 1954 ntBASIC16.55■□□□□ 0.24
LMO3Q8TAP4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO3Q8TAP4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO3Q8TAP4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 HLA-K-203ENST00000430151 1046 ntBASIC16.53■□□□□ 0.24
LMO3Q8TAP4 DFFBP1-201ENST00000433250 979 ntBASIC16.53■□□□□ 0.24
LMO3Q8TAP4 FAM207CP-201ENST00000443486 507 ntBASIC16.53■□□□□ 0.24
LMO3Q8TAP4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 LINC02560-201ENST00000596379 459 ntBASIC16.53■□□□□ 0.24
LMO3Q8TAP4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.53■□□□□ 0.24
LMO3Q8TAP4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms