Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 AC009955.4-201ENST00000597192 544 ntBASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
CCDC168Q8NDH2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.83□□□□□ -0.35
CCDC168Q8NDH2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.35
CCDC168Q8NDH2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 FAM58BP-201ENST00000439056 645 ntBASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 ALG1L6P-201ENST00000515248 758 ntBASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 SCARNA21-201ENST00000517026 139 ntBASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 AP000356.3-201ENST00000382243 753 ntBASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CCDC168Q8NDH2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 ACTBP8-201ENST00000403258 1108 ntBASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 MEG3_2.1-201ENST00000611456 105 ntBASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 AL512430.1-201ENST00000392575 860 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms