Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 AC090616.6-203ENST00000579186 1945 ntBASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 MIR3197-201ENST00000582241 73 ntBASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 AC105917.1-201ENST00000506637 2539 ntBASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB42Q8N4Z0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 AC140912.1-201ENST00000577171 1054 ntBASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB42Q8N4Z0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB42Q8N4Z0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms