Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 AC009947.1-201ENST00000444350 727 ntBASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 PHKG1P2-201ENST00000457537 863 ntBASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 KRT18P58-201ENST00000527480 1120 ntBASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 AC096734.2-201ENST00000562054 433 ntBASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 AC034105.1-201ENST00000563488 319 ntBASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 AC140479.7-201ENST00000636301 2332 ntBASIC15.59■□□□□ 0.09
TRIM42Q8IWZ5 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.58■□□□□ 0.09
TRIM42Q8IWZ5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM42Q8IWZ5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.58■□□□□ 0.09
TRIM42Q8IWZ5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRIM42Q8IWZ5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM42Q8IWZ5 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM42Q8IWZ5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
TRIM42Q8IWZ5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM42Q8IWZ5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 CRYGEP-201ENST00000412192 528 ntBASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 RPS8P6-201ENST00000426177 609 ntBASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 AL671883.3-201ENST00000603274 991 ntBASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 AC023141.13-201ENST00000604991 943 ntBASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM42Q8IWZ5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 RHOQP3-201ENST00000437982 621 ntBASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM42Q8IWZ5 AC073389.1-201ENST00000595595 795 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms