Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 SHC1P1-201ENST00000425230 1745 ntBASIC12.74□□□□□ -0.37
CSMD2Q7Z408 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 AL645728.2-202ENST00000641679 227 ntBASIC12.74□□□□□ -0.37
CSMD2Q7Z408 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD2Q7Z408 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD2Q7Z408 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AC093909.3-201ENST00000504783 336 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 FAM90A2P-201ENST00000511144 1395 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 FAM90A25P-201ENST00000528404 1395 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AL157813.1-201ENST00000612996 587 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AC099398.1-201ENST00000567919 2776 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 COX20P1-201ENST00000366529 357 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AC008805.1-201ENST00000590892 364 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms