Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 SNX18-202ENST00000343017 3140 ntBASIC17.49■□□□□ 0.39
SHC4Q6S5L8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 TSSK5P-201ENST00000423978 907 ntBASIC17.49■□□□□ 0.39
SHC4Q6S5L8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 AL158211.3-201ENST00000607385 239 ntBASIC17.49■□□□□ 0.39
SHC4Q6S5L8 AC023511.2-201ENST00000618803 211 ntBASIC17.49■□□□□ 0.39
SHC4Q6S5L8 AC004461.2-201ENST00000629517 803 ntBASIC17.49■□□□□ 0.39
SHC4Q6S5L8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 AC007191.1-201ENST00000623179 2995 ntBASIC17.49■□□□□ 0.39
SHC4Q6S5L8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 AC000095.1-201ENST00000603208 874 ntBASIC17.48■□□□□ 0.39
SHC4Q6S5L8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 AC079781.4-201ENST00000641908 219 ntBASIC17.48■□□□□ 0.39
SHC4Q6S5L8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC4Q6S5L8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 AC005912.2-201ENST00000619492 2400 ntBASIC17.47■□□□□ 0.39
SHC4Q6S5L8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 AC009407.1-201ENST00000568958 598 ntBASIC17.47■□□□□ 0.39
SHC4Q6S5L8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms