Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 AC020658.6-201ENST00000623564 1870 ntBASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 AC026954.1-201ENST00000429771 1293 ntBASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 FAM197Y7-201ENST00000432892 766 ntBASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC27A1Q6PCB7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 AC006001.1-201ENST00000325130 474 ntBASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 FAM21FP-201ENST00000426241 1131 ntBASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 RNA5SP486-201ENST00000515961 83 ntBASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 AL583810.1-201ENST00000553344 1045 ntBASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC27A1Q6PCB7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 YBX1P6-201ENST00000442962 1002 ntBASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC27A1Q6PCB7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms