Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.85□□□□□ -0.35
SRPXP78539 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRPXP78539 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRPXP78539 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SRPXP78539 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRPXP78539 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRPXP78539 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SRPXP78539 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SRPXP78539 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
SRPXP78539 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 IGLL3P-201ENST00000412472 434 ntBASIC12.84□□□□□ -0.35
SRPXP78539 GHSR-202ENST00000427970 912 ntBASIC12.84□□□□□ -0.35
SRPXP78539 AC018712.1-201ENST00000455767 687 ntBASIC12.84□□□□□ -0.35
SRPXP78539 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SRPXP78539 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.84□□□□□ -0.35
SRPXP78539 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.84□□□□□ -0.35
SRPXP78539 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 AC084364.1-201ENST00000551967 1556 ntBASIC12.84□□□□□ -0.35
SRPXP78539 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.84□□□□□ -0.35
SRPXP78539 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRPXP78539 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SRPXP78539 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
SRPXP78539 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SRPXP78539 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SRPXP78539 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SRPXP78539 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
SRPXP78539 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SRPXP78539 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.83□□□□□ -0.35
SRPXP78539 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
SRPXP78539 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
SRPXP78539 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.83□□□□□ -0.35
SRPXP78539 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.83□□□□□ -0.36
SRPXP78539 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SRPXP78539 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.83□□□□□ -0.36
SRPXP78539 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SRPXP78539 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.83□□□□□ -0.36
SRPXP78539 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.83□□□□□ -0.36
SRPXP78539 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRPXP78539 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.83□□□□□ -0.36
SRPXP78539 KRT18P67-201ENST00000432816 1264 ntBASIC12.83□□□□□ -0.36
SRPXP78539 HCG4P8-203ENST00000443049 980 ntBASIC12.83□□□□□ -0.36
SRPXP78539 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.83□□□□□ -0.36
SRPXP78539 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.83□□□□□ -0.36
SRPXP78539 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.83□□□□□ -0.36
SRPXP78539 UNC93B6-202ENST00000528242 690 ntBASIC12.83□□□□□ -0.36
SRPXP78539 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.83□□□□□ -0.36
SRPXP78539 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.83□□□□□ -0.36
SRPXP78539 AC012640.2-201ENST00000561606 901 ntBASIC12.83□□□□□ -0.36
SRPXP78539 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SRPXP78539 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SRPXP78539 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms