Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.26■□□□□ 0.19
IRX4P78413 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.26■□□□□ 0.19
IRX4P78413 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IRX4P78413 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
IRX4P78413 WASH4P-201ENST00000564273 1246 ntBASIC16.26■□□□□ 0.19
IRX4P78413 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
IRX4P78413 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.26■□□□□ 0.19
IRX4P78413 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX4P78413 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.26■□□□□ 0.19
IRX4P78413 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IRX4P78413 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.26■□□□□ 0.19
IRX4P78413 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX4P78413 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
IRX4P78413 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX4P78413 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX4P78413 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IRX4P78413 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.25■□□□□ 0.19
IRX4P78413 AL592424.1-201ENST00000563624 1536 ntBASIC16.25■□□□□ 0.19
IRX4P78413 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.25■□□□□ 0.19
IRX4P78413 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IRX4P78413 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
IRX4P78413 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
IRX4P78413 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 MIR648-201ENST00000385046 94 ntBASIC16.25■□□□□ 0.19
IRX4P78413 AL080243.2-201ENST00000418783 582 ntBASIC16.25■□□□□ 0.19
IRX4P78413 AC022210.1-201ENST00000449856 793 ntBASIC16.25■□□□□ 0.19
IRX4P78413 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.25■□□□□ 0.19
IRX4P78413 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
IRX4P78413 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
IRX4P78413 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
IRX4P78413 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.25■□□□□ 0.19
IRX4P78413 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
IRX4P78413 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IRX4P78413 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
IRX4P78413 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.25■□□□□ 0.19
IRX4P78413 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IRX4P78413 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.25■□□□□ 0.19
IRX4P78413 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.24■□□□□ 0.19
IRX4P78413 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
IRX4P78413 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX4P78413 AC073439.1-201ENST00000624121 1774 ntBASIC16.24■□□□□ 0.19
IRX4P78413 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX4P78413 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX4P78413 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX4P78413 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX4P78413 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 AC093004.1-201ENST00000508850 424 ntBASIC16.24■□□□□ 0.19
IRX4P78413 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX4P78413 ZNF890P-202ENST00000530367 1156 ntBASIC16.24■□□□□ 0.19
IRX4P78413 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX4P78413 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.24■□□□□ 0.19
IRX4P78413 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX4P78413 AC004790.1-201ENST00000612686 536 ntBASIC16.24■□□□□ 0.19
IRX4P78413 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.24■□□□□ 0.19
IRX4P78413 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
IRX4P78413 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX4P78413 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms