Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST1H3AP68431 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H3AP68431 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST1H3AP68431 ZBED1P1-201ENST00000502364 1930 ntBASIC13.58□□□□□ -0.23
HIST1H3AP68431 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HIST1H3AP68431 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST1H3AP68431 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST1H3AP68431 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 TIMM17BP1-201ENST00000545713 516 ntBASIC13.58□□□□□ -0.24
HIST1H3AP68431 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 AC011467.4-201ENST00000594891 528 ntBASIC13.58□□□□□ -0.24
HIST1H3AP68431 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 AC067930.6-201ENST00000623257 4947 ntBASIC13.58□□□□□ -0.24
HIST1H3AP68431 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 CICP11-201ENST00000434745 2827 ntBASIC13.58□□□□□ -0.24
HIST1H3AP68431 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST1H3AP68431 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H3AP68431 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 MEIS3P1-201ENST00000495167 958 ntBASIC13.57□□□□□ -0.24
HIST1H3AP68431 IGHV3-42-201ENST00000520410 361 ntBASIC13.57□□□□□ -0.24
HIST1H3AP68431 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AL390955.2-201ENST00000603032 514 ntBASIC13.57□□□□□ -0.24
HIST1H3AP68431 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
HIST1H3AP68431 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H3AP68431 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms