Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH13P55290 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CDH13P55290 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH13P55290 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH13P55290 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH13P55290 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH13P55290 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH13P55290 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 RPSAP43-201ENST00000402237 625 ntBASIC15.23■□□□□ 0.03
CDH13P55290 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH13P55290 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH13P55290 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH13P55290 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH13P55290 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH13P55290 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH13P55290 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH13P55290 AC009093.7-201ENST00000623853 1223 ntBASIC15.23■□□□□ 0.03
CDH13P55290 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH13P55290 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDH13P55290 MROH4P-201ENST00000431302 1578 ntBASIC15.23■□□□□ 0.03
CDH13P55290 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CDH13P55290 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 AL035456.1-201ENST00000456064 1369 ntBASIC15.23■□□□□ 0.03
CDH13P55290 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH13P55290 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH13P55290 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH13P55290 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 AC074338.1-201ENST00000416825 156 ntBASIC15.22■□□□□ 0.03
CDH13P55290 AC023141.5-201ENST00000458585 616 ntBASIC15.22■□□□□ 0.03
CDH13P55290 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH13P55290 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH13P55290 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH13P55290 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 AL079307.3-201ENST00000556114 283 ntBASIC15.22■□□□□ 0.03
CDH13P55290 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH13P55290 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH13P55290 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH13P55290 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH13P55290 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH13P55290 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDH13P55290 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CDH13P55290 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH13P55290 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH13P55290 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH13P55290 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH13P55290 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms