Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CDH12P55289 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 CEND1P1-201ENST00000451006 455 ntBASIC14.54□□□□□ -0.08
CDH12P55289 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.54□□□□□ -0.08
CDH12P55289 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH12P55289 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH12P55289 RARRES2P9-201ENST00000565168 469 ntBASIC14.54□□□□□ -0.08
CDH12P55289 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH12P55289 AC022145.2-201ENST00000598203 171 ntBASIC14.54□□□□□ -0.08
CDH12P55289 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH12P55289 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH12P55289 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH12P55289 AC105339.1-204ENST00000636249 355 ntBASIC14.54□□□□□ -0.08
CDH12P55289 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 ZBED1P1-201ENST00000502364 1930 ntBASIC14.54□□□□□ -0.08
CDH12P55289 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH12P55289 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDH12P55289 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDH12P55289 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH12P55289 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH12P55289 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH12P55289 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 AC005829.1-201ENST00000570002 483 ntBASIC14.53□□□□□ -0.08
CDH12P55289 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.53□□□□□ -0.08
CDH12P55289 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH12P55289 AC026979.3-201ENST00000607315 403 ntBASIC14.53□□□□□ -0.08
CDH12P55289 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDH12P55289 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDH12P55289 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH12P55289 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.53□□□□□ -0.08
CDH12P55289 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH12P55289 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CDH12P55289 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH12P55289 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH12P55289 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDH12P55289 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH12P55289 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH12P55289 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH12P55289 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH12P55289 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH12P55289 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH12P55289 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH12P55289 AL359258.3-201ENST00000622910 2331 ntBASIC14.52□□□□□ -0.08
CDH12P55289 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms