Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDH6P55285 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDH6P55285 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH6P55285 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH6P55285 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH6P55285 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH6P55285 TOMM22P5-201ENST00000416399 439 ntBASIC16.18■□□□□ 0.18
CDH6P55285 TSSK5P-201ENST00000423978 907 ntBASIC16.18■□□□□ 0.18
CDH6P55285 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH6P55285 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.18■□□□□ 0.18
CDH6P55285 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
CDH6P55285 ZNF890P-202ENST00000530367 1156 ntBASIC16.18■□□□□ 0.18
CDH6P55285 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH6P55285 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH6P55285 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.18■□□□□ 0.18
CDH6P55285 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
CDH6P55285 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH6P55285 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH6P55285 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH6P55285 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH6P55285 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH6P55285 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH6P55285 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH6P55285 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH6P55285 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH6P55285 AGAP7P-201ENST00000582299 2062 ntBASIC16.17■□□□□ 0.18
CDH6P55285 AGAP14-201ENST00000624701 2060 ntBASIC16.17■□□□□ 0.18
CDH6P55285 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH6P55285 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH6P55285 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH6P55285 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH6P55285 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDH6P55285 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH6P55285 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDH6P55285 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH6P55285 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDH6P55285 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH6P55285 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH6P55285 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CDH6P55285 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 AL121723.1-201ENST00000445194 1519 ntBASIC16.17■□□□□ 0.18
CDH6P55285 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH6P55285 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDH6P55285 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH6P55285 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
CDH6P55285 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH6P55285 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH6P55285 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH6P55285 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH6P55285 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDH6P55285 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH6P55285 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CDH6P55285 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDH6P55285 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CDH6P55285 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH6P55285 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH6P55285 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDH6P55285 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH6P55285 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms