Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2AP42771 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.89□□□□□ -0.19
CDKN2AP42771 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2AP42771 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDKN2AP42771 ACE3P-201ENST00000423435 1973 ntBASIC13.89□□□□□ -0.19
CDKN2AP42771 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.89□□□□□ -0.19
CDKN2AP42771 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2AP42771 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2AP42771 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.89□□□□□ -0.19
CDKN2AP42771 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2AP42771 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
CDKN2AP42771 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.88□□□□□ -0.19
CDKN2AP42771 LINC00552-201ENST00000625151 2579 ntBASIC13.88□□□□□ -0.19
CDKN2AP42771 AC023908.3-201ENST00000564211 3047 ntBASIC13.88□□□□□ -0.19
CDKN2AP42771 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 AL390755.1-201ENST00000623716 2027 ntBASIC13.88□□□□□ -0.19
CDKN2AP42771 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CDKN2AP42771 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 AC007292.2-201ENST00000593524 1812 ntBASIC13.88□□□□□ -0.19
CDKN2AP42771 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.88□□□□□ -0.19
CDKN2AP42771 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 RPL13P2-201ENST00000440687 659 ntBASIC13.88□□□□□ -0.19
CDKN2AP42771 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2AP42771 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 SNHG9-202ENST00000564014 471 ntBASIC13.88□□□□□ -0.19
CDKN2AP42771 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.88□□□□□ -0.19
CDKN2AP42771 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2AP42771 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 AP000845.1-201ENST00000581677 2131 ntBASIC13.88□□□□□ -0.19
CDKN2AP42771 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2AP42771 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2AP42771 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2AP42771 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.87□□□□□ -0.19
CDKN2AP42771 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.87□□□□□ -0.19
CDKN2AP42771 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.87□□□□□ -0.19
CDKN2AP42771 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CDKN2AP42771 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.87□□□□□ -0.19
CDKN2AP42771 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
CDKN2AP42771 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.87□□□□□ -0.19
CDKN2AP42771 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.87□□□□□ -0.19
CDKN2AP42771 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDKN2AP42771 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CDKN2AP42771 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CDKN2AP42771 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDKN2AP42771 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms