Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.76■□□□□ 0.11
RPA3P35244 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
RPA3P35244 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.76■□□□□ 0.11
RPA3P35244 HLA-H-201ENST00000383620 1096 ntBASIC15.76■□□□□ 0.11
RPA3P35244 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RPA3P35244 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.76■□□□□ 0.11
RPA3P35244 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RPA3P35244 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RPA3P35244 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.76■□□□□ 0.11
RPA3P35244 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RPA3P35244 AC009093.7-201ENST00000623853 1223 ntBASIC15.76■□□□□ 0.11
RPA3P35244 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.76■□□□□ 0.11
RPA3P35244 AC084121.4-201ENST00000641598 221 ntBASIC15.76■□□□□ 0.11
RPA3P35244 AF228730.8-201ENST00000642140 221 ntBASIC15.76■□□□□ 0.11
RPA3P35244 FOXO1B-201ENST00000504678 1527 ntBASIC15.76■□□□□ 0.11
RPA3P35244 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.76■□□□□ 0.11
RPA3P35244 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.76■□□□□ 0.11
RPA3P35244 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.76■□□□□ 0.11
RPA3P35244 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.76■□□□□ 0.11
RPA3P35244 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.76■□□□□ 0.11
RPA3P35244 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPA3P35244 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.76■□□□□ 0.11
RPA3P35244 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.75■□□□□ 0.11
RPA3P35244 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.75■□□□□ 0.11
RPA3P35244 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.75■□□□□ 0.11
RPA3P35244 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RPA3P35244 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.75■□□□□ 0.11
RPA3P35244 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
RPA3P35244 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 FAM58DP-201ENST00000428076 619 ntBASIC15.75■□□□□ 0.11
RPA3P35244 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.75■□□□□ 0.11
RPA3P35244 RBPMS2P1-201ENST00000437762 623 ntBASIC15.75■□□□□ 0.11
RPA3P35244 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.75■□□□□ 0.11
RPA3P35244 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.75■□□□□ 0.11
RPA3P35244 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
RPA3P35244 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.75■□□□□ 0.11
RPA3P35244 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.75■□□□□ 0.11
RPA3P35244 AP001160.2-201ENST00000596071 487 ntBASIC15.75■□□□□ 0.11
RPA3P35244 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.75■□□□□ 0.11
RPA3P35244 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.75■□□□□ 0.11
RPA3P35244 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RPA3P35244 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RPA3P35244 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RPA3P35244 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.75■□□□□ 0.11
RPA3P35244 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPA3P35244 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.75■□□□□ 0.11
RPA3P35244 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
RPA3P35244 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RPA3P35244 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RPA3P35244 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.74■□□□□ 0.11
RPA3P35244 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
RPA3P35244 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RPA3P35244 AC004987.2-201ENST00000395959 1148 ntBASIC15.74■□□□□ 0.11
RPA3P35244 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.74■□□□□ 0.11
RPA3P35244 ALG1L8P-201ENST00000533887 760 ntBASIC15.74■□□□□ 0.11
RPA3P35244 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.74■□□□□ 0.11
RPA3P35244 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.74■□□□□ 0.11
RPA3P35244 AC027612.4-201ENST00000605371 583 ntBASIC15.74■□□□□ 0.11
RPA3P35244 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.74■□□□□ 0.11
RPA3P35244 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.74■□□□□ 0.11
RPA3P35244 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPA3P35244 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RPA3P35244 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.74■□□□□ 0.11
RPA3P35244 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms