Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.31□□□□□ -0.12
ABCD3P28288 COX20P2-201ENST00000452636 358 ntBASIC14.31□□□□□ -0.12
ABCD3P28288 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.31□□□□□ -0.12
ABCD3P28288 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.31□□□□□ -0.12
ABCD3P28288 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.31□□□□□ -0.12
ABCD3P28288 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.31□□□□□ -0.12
ABCD3P28288 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.31□□□□□ -0.12
ABCD3P28288 CTBP2P3-201ENST00000585629 1255 ntBASIC14.31□□□□□ -0.12
ABCD3P28288 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.31□□□□□ -0.12
ABCD3P28288 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
ABCD3P28288 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.31□□□□□ -0.12
ABCD3P28288 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.31□□□□□ -0.12
ABCD3P28288 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ABCD3P28288 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ABCD3P28288 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ABCD3P28288 INTS4P2-202ENST00000614726 2019 ntBASIC14.31□□□□□ -0.12
ABCD3P28288 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
ABCD3P28288 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ABCD3P28288 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ABCD3P28288 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.3□□□□□ -0.12
ABCD3P28288 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.3□□□□□ -0.12
ABCD3P28288 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ABCD3P28288 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ABCD3P28288 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.3□□□□□ -0.12
ABCD3P28288 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.3□□□□□ -0.12
ABCD3P28288 VDAC1P7-201ENST00000462417 847 ntBASIC14.3□□□□□ -0.12
ABCD3P28288 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ABCD3P28288 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.3□□□□□ -0.12
ABCD3P28288 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.3□□□□□ -0.12
ABCD3P28288 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.3□□□□□ -0.12
ABCD3P28288 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.3□□□□□ -0.12
ABCD3P28288 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ABCD3P28288 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.3□□□□□ -0.12
ABCD3P28288 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.3□□□□□ -0.12
ABCD3P28288 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.3□□□□□ -0.12
ABCD3P28288 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ABCD3P28288 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
ABCD3P28288 AC099063.4-201ENST00000641099 1602 ntBASIC14.3□□□□□ -0.12
ABCD3P28288 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ABCD3P28288 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ABCD3P28288 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ABCD3P28288 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ABCD3P28288 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.29□□□□□ -0.12
ABCD3P28288 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.29□□□□□ -0.12
ABCD3P28288 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.29□□□□□ -0.12
ABCD3P28288 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.29□□□□□ -0.12
ABCD3P28288 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.29□□□□□ -0.12
ABCD3P28288 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.29□□□□□ -0.12
ABCD3P28288 AC134915.1-201ENST00000426461 574 ntBASIC14.29□□□□□ -0.12
ABCD3P28288 AC026410.3-201ENST00000514280 936 ntBASIC14.29□□□□□ -0.12
ABCD3P28288 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.29□□□□□ -0.12
ABCD3P28288 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ABCD3P28288 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms