Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN3P26045 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN3P26045 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PTPN3P26045 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.83■□□□□ 0.13
PTPN3P26045 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN3P26045 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PTPN3P26045 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 AL512638.1-201ENST00000457493 794 ntBASIC15.83■□□□□ 0.12
PTPN3P26045 CYMP-203ENST00000474680 1263 ntBASIC15.83■□□□□ 0.12
PTPN3P26045 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.83■□□□□ 0.12
PTPN3P26045 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.83■□□□□ 0.12
PTPN3P26045 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.83■□□□□ 0.12
PTPN3P26045 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PTPN3P26045 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.83■□□□□ 0.12
PTPN3P26045 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.83■□□□□ 0.12
PTPN3P26045 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.83■□□□□ 0.12
PTPN3P26045 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
PTPN3P26045 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN3P26045 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN3P26045 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 LINC00528-201ENST00000600723 2160 ntBASIC15.82■□□□□ 0.12
PTPN3P26045 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN3P26045 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN3P26045 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.82■□□□□ 0.12
PTPN3P26045 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.82■□□□□ 0.12
PTPN3P26045 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.82■□□□□ 0.12
PTPN3P26045 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 AC104794.3-201ENST00000566840 1248 ntBASIC15.82■□□□□ 0.12
PTPN3P26045 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PTPN3P26045 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 AC023824.1-201ENST00000562945 2975 ntBASIC15.82■□□□□ 0.12
PTPN3P26045 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN3P26045 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN3P26045 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PTPN3P26045 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PTPN3P26045 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN3P26045 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN3P26045 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTPN3P26045 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
PTPN3P26045 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms