Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.21□□□□□ -0.29
VAMP1P23763 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 PMS2P4-201ENST00000412466 1052 ntBASIC13.21□□□□□ -0.29
VAMP1P23763 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.21□□□□□ -0.29
VAMP1P23763 MIR4515-201ENST00000584082 81 ntBASIC13.21□□□□□ -0.29
VAMP1P23763 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.21□□□□□ -0.29
VAMP1P23763 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.21□□□□□ -0.3
VAMP1P23763 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
VAMP1P23763 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.21□□□□□ -0.3
VAMP1P23763 LSINCT5-201ENST00000626215 2647 ntBASIC13.21□□□□□ -0.3
VAMP1P23763 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
VAMP1P23763 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.21□□□□□ -0.3
VAMP1P23763 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VAMP1P23763 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.2□□□□□ -0.3
VAMP1P23763 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
VAMP1P23763 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.2□□□□□ -0.3
VAMP1P23763 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VAMP1P23763 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
VAMP1P23763 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.2□□□□□ -0.3
VAMP1P23763 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.2□□□□□ -0.3
VAMP1P23763 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
VAMP1P23763 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.2□□□□□ -0.3
VAMP1P23763 Z95114.2-201ENST00000623490 2205 ntBASIC13.2□□□□□ -0.3
VAMP1P23763 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 AL645939.2-201ENST00000427340 991 ntBASIC13.2□□□□□ -0.3
VAMP1P23763 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.2□□□□□ -0.3
VAMP1P23763 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.2□□□□□ -0.3
VAMP1P23763 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.2□□□□□ -0.3
VAMP1P23763 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VAMP1P23763 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
VAMP1P23763 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.2□□□□□ -0.3
VAMP1P23763 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.2□□□□□ -0.3
VAMP1P23763 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP1P23763 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.19□□□□□ -0.3
VAMP1P23763 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.19□□□□□ -0.3
VAMP1P23763 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
VAMP1P23763 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
VAMP1P23763 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
VAMP1P23763 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
VAMP1P23763 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VAMP1P23763 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.19□□□□□ -0.3
VAMP1P23763 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
VAMP1P23763 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VAMP1P23763 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.19□□□□□ -0.3
VAMP1P23763 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms