Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 GAPDHP40-201ENST00000505218 1006 ntBASIC16.43■□□□□ 0.22
CCDC130P13994 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.43■□□□□ 0.22
CCDC130P13994 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC130P13994 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.43■□□□□ 0.22
CCDC130P13994 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC130P13994 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC130P13994 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC130P13994 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC130P13994 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC130P13994 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC130P13994 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CCDC130P13994 SOCS2P1-201ENST00000417727 557 ntBASIC16.42■□□□□ 0.22
CCDC130P13994 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC130P13994 GAPDHP21-201ENST00000450301 1010 ntBASIC16.42■□□□□ 0.22
CCDC130P13994 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
CCDC130P13994 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC130P13994 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC130P13994 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC130P13994 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC130P13994 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 RPSAP52-203ENST00000622976 1023 ntBASIC16.42■□□□□ 0.22
CCDC130P13994 CU634019.7-201ENST00000624153 1185 ntBASIC16.42■□□□□ 0.22
CCDC130P13994 FP236241.2-201ENST00000624906 1185 ntBASIC16.42■□□□□ 0.22
CCDC130P13994 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC130P13994 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC130P13994 AC126177.1-201ENST00000547829 2218 ntBASIC16.42■□□□□ 0.22
CCDC130P13994 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC130P13994 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC130P13994 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC130P13994 CICP11-201ENST00000434745 2827 ntBASIC16.41■□□□□ 0.22
CCDC130P13994 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC130P13994 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC130P13994 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC130P13994 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC130P13994 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC130P13994 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC130P13994 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC130P13994 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC130P13994 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC130P13994 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC130P13994 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC130P13994 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC130P13994 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC130P13994 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC130P13994 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC130P13994 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC130P13994 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC130P13994 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC130P13994 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC130P13994 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC130P13994 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC130P13994 AL512384.1-201ENST00000406683 331 ntBASIC16.41■□□□□ 0.22
CCDC130P13994 AC011495.1-201ENST00000498085 584 ntBASIC16.41■□□□□ 0.22
CCDC130P13994 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms