Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.25■□□□□ 0.35
COL11A1P12107 AC023090.2-201ENST00000625182 2110 ntBASIC17.25■□□□□ 0.35
COL11A1P12107 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.25■□□□□ 0.35
COL11A1P12107 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
COL11A1P12107 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 HINT2P1-201ENST00000419438 481 ntBASIC17.25■□□□□ 0.35
COL11A1P12107 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.25■□□□□ 0.35
COL11A1P12107 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.25■□□□□ 0.35
COL11A1P12107 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 AC005962.1-201ENST00000584100 773 ntBASIC17.25■□□□□ 0.35
COL11A1P12107 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.25■□□□□ 0.35
COL11A1P12107 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COL11A1P12107 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.25■□□□□ 0.35
COL11A1P12107 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.25■□□□□ 0.35
COL11A1P12107 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.25■□□□□ 0.35
COL11A1P12107 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.25■□□□□ 0.35
COL11A1P12107 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL11A1P12107 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
COL11A1P12107 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 AC023024.2-201ENST00000623561 1993 ntBASIC17.24■□□□□ 0.35
COL11A1P12107 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 KRT18P36-201ENST00000411618 1276 ntBASIC17.24■□□□□ 0.35
COL11A1P12107 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.24■□□□□ 0.35
COL11A1P12107 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.24■□□□□ 0.35
COL11A1P12107 RN7SL774P-201ENST00000577467 290 ntBASIC17.24■□□□□ 0.35
COL11A1P12107 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.24■□□□□ 0.35
COL11A1P12107 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.24■□□□□ 0.35
COL11A1P12107 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.24■□□□□ 0.35
COL11A1P12107 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.24■□□□□ 0.35
COL11A1P12107 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.24■□□□□ 0.35
COL11A1P12107 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 AC244394.1-201ENST00000435000 1665 ntBASIC17.24■□□□□ 0.35
COL11A1P12107 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
COL11A1P12107 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL11A1P12107 AC016629.1-201ENST00000596579 586 ntBASIC17.24■□□□□ 0.35
COL11A1P12107 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
COL11A1P12107 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.24■□□□□ 0.35
COL11A1P12107 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
COL11A1P12107 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.23■□□□□ 0.35
COL11A1P12107 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.23■□□□□ 0.35
COL11A1P12107 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.23■□□□□ 0.35
COL11A1P12107 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COL11A1P12107 REXO1L2P-201ENST00000425429 2069 ntBASIC17.23■□□□□ 0.35
COL11A1P12107 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 TUBBP5-203ENST00000508529 1334 ntBASIC17.23■□□□□ 0.35
COL11A1P12107 AC003102.2-201ENST00000589195 1469 ntBASIC17.23■□□□□ 0.35
COL11A1P12107 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.23■□□□□ 0.35
COL11A1P12107 DPM3-202ENST00000368399 517 ntBASIC17.23■□□□□ 0.35
COL11A1P12107 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.23■□□□□ 0.35
COL11A1P12107 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.23■□□□□ 0.35
COL11A1P12107 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms