Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CXCL1P09341 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.11□□□□□ -0.47
CXCL1P09341 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.11□□□□□ -0.47
CXCL1P09341 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL1P09341 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CXCL1P09341 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CXCL1P09341 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL1P09341 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
CXCL1P09341 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL1P09341 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CXCL1P09341 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL1P09341 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL1P09341 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 ACE3P-201ENST00000423435 1973 ntBASIC12.1□□□□□ -0.47
CXCL1P09341 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CXCL1P09341 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 RBM17P3-201ENST00000417687 1192 ntBASIC12.1□□□□□ -0.47
CXCL1P09341 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 AC106795.1-205ENST00000512851 1056 ntBASIC12.1□□□□□ -0.47
CXCL1P09341 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.1□□□□□ -0.47
CXCL1P09341 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.1□□□□□ -0.47
CXCL1P09341 AC139887.3-201ENST00000568585 713 ntBASIC12.1□□□□□ -0.47
CXCL1P09341 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.1□□□□□ -0.47
CXCL1P09341 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.1□□□□□ -0.47
CXCL1P09341 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.1□□□□□ -0.47
CXCL1P09341 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.1□□□□□ -0.47
CXCL1P09341 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CXCL1P09341 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CXCL1P09341 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CXCL1P09341 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL1P09341 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL1P09341 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL1P09341 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.09□□□□□ -0.47
CXCL1P09341 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.09□□□□□ -0.47
CXCL1P09341 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.09□□□□□ -0.47
CXCL1P09341 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.09□□□□□ -0.47
CXCL1P09341 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL1P09341 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.09□□□□□ -0.47
CXCL1P09341 BEND3P3-201ENST00000611030 2440 ntBASIC12.09□□□□□ -0.47
CXCL1P09341 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL1P09341 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL1P09341 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL1P09341 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.09□□□□□ -0.47
CXCL1P09341 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CXCL1P09341 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL1P09341 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CXCL1P09341 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL1P09341 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.09□□□□□ -0.47
CXCL1P09341 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.09□□□□□ -0.47
CXCL1P09341 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.09□□□□□ -0.47
CXCL1P09341 U82695.1-201ENST00000635752 1889 ntBASIC12.09□□□□□ -0.47
CXCL1P09341 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL1P09341 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms