Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.09■□□□□ 0.17
CD48P09326 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.09■□□□□ 0.17
CD48P09326 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
CD48P09326 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CD48P09326 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CD48P09326 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.09■□□□□ 0.17
CD48P09326 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.09■□□□□ 0.17
CD48P09326 MRPS18AP1-201ENST00000414458 589 ntBASIC16.09■□□□□ 0.17
CD48P09326 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.09■□□□□ 0.17
CD48P09326 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.09■□□□□ 0.17
CD48P09326 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.09■□□□□ 0.17
CD48P09326 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.09■□□□□ 0.17
CD48P09326 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CD48P09326 RFPL4AP1-201ENST00000530883 850 ntBASIC16.09■□□□□ 0.17
CD48P09326 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
CD48P09326 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.09■□□□□ 0.17
CD48P09326 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.09■□□□□ 0.17
CD48P09326 AL158212.4-201ENST00000624062 1286 ntBASIC16.09■□□□□ 0.17
CD48P09326 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.09■□□□□ 0.17
CD48P09326 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD48P09326 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 CICP23-201ENST00000605013 2741 ntBASIC16.09■□□□□ 0.17
CD48P09326 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CD48P09326 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.09■□□□□ 0.17
CD48P09326 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.08■□□□□ 0.17
CD48P09326 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CD48P09326 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CD48P09326 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
CD48P09326 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD48P09326 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 ZBED1P1-201ENST00000502364 1930 ntBASIC16.08■□□□□ 0.16
CD48P09326 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 REXO1L2P-201ENST00000425429 2069 ntBASIC16.08■□□□□ 0.16
CD48P09326 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CD48P09326 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.08■□□□□ 0.16
CD48P09326 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.08■□□□□ 0.16
CD48P09326 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.08■□□□□ 0.16
CD48P09326 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.08■□□□□ 0.16
CD48P09326 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.08■□□□□ 0.16
CD48P09326 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.08■□□□□ 0.16
CD48P09326 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.08■□□□□ 0.16
CD48P09326 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CD48P09326 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.08■□□□□ 0.16
CD48P09326 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.08■□□□□ 0.16
CD48P09326 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD48P09326 AC022144.1-201ENST00000602255 1580 ntBASIC16.08■□□□□ 0.16
CD48P09326 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.08■□□□□ 0.16
CD48P09326 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.08■□□□□ 0.16
CD48P09326 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.07■□□□□ 0.16
CD48P09326 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CD48P09326 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.07■□□□□ 0.16
CD48P09326 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD48P09326 PMS2P2-201ENST00000425039 1128 ntBASIC16.07■□□□□ 0.16
CD48P09326 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.07■□□□□ 0.16
CD48P09326 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.07■□□□□ 0.16
CD48P09326 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.07■□□□□ 0.16
CD48P09326 AC135586.1-201ENST00000539323 574 ntBASIC16.07■□□□□ 0.16
CD48P09326 TIMM17BP1-201ENST00000545713 516 ntBASIC16.07■□□□□ 0.16
CD48P09326 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.07■□□□□ 0.16
CD48P09326 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms