Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.69■□□□□ 0.26
TUBB4AP04350 AL691432.3-201ENST00000621860 400 ntBASIC16.69■□□□□ 0.26
TUBB4AP04350 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBB4AP04350 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBB4AP04350 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBB4AP04350 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 AC015818.8-201ENST00000587907 1519 ntBASIC16.69■□□□□ 0.26
TUBB4AP04350 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBB4AP04350 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBB4AP04350 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TUBB4AP04350 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBB4AP04350 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBB4AP04350 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TUBB4AP04350 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.68■□□□□ 0.26
TUBB4AP04350 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TUBB4AP04350 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.68■□□□□ 0.26
TUBB4AP04350 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TUBB4AP04350 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.68■□□□□ 0.26
TUBB4AP04350 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBB4AP04350 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.68■□□□□ 0.26
TUBB4AP04350 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.68■□□□□ 0.26
TUBB4AP04350 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.68■□□□□ 0.26
TUBB4AP04350 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TUBB4AP04350 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.68■□□□□ 0.26
TUBB4AP04350 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBB4AP04350 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TUBB4AP04350 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBB4AP04350 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TUBB4AP04350 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TUBB4AP04350 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBB4AP04350 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.67■□□□□ 0.26
TUBB4AP04350 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.67■□□□□ 0.26
TUBB4AP04350 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBB4AP04350 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBB4AP04350 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
TUBB4AP04350 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.67■□□□□ 0.26
TUBB4AP04350 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
TUBB4AP04350 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBB4AP04350 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBB4AP04350 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.67■□□□□ 0.26
TUBB4AP04350 AL513480.1-201ENST00000451731 511 ntBASIC16.67■□□□□ 0.26
TUBB4AP04350 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
TUBB4AP04350 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBB4AP04350 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.67■□□□□ 0.26
TUBB4AP04350 AC012313.10-201ENST00000623509 926 ntBASIC16.67■□□□□ 0.26
TUBB4AP04350 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBB4AP04350 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBB4AP04350 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBB4AP04350 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBB4AP04350 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.67■□□□□ 0.26
TUBB4AP04350 AC012508.2-201ENST00000567613 1472 ntBASIC16.67■□□□□ 0.26
TUBB4AP04350 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms