Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NKX2-2O95096 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-2O95096 AC012508.2-201ENST00000567613 1472 ntBASIC14.31□□□□□ -0.12
NKX2-2O95096 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-2O95096 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
NKX2-2O95096 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 TSPY16P-201ENST00000449843 468 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.3□□□□□ -0.12
NKX2-2O95096 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX2-2O95096 SERBP1P5-201ENST00000510079 1181 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.3□□□□□ -0.12
NKX2-2O95096 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-2O95096 AC055876.2-201ENST00000531834 546 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 SPCS2P1-201ENST00000561636 679 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 SAMD11P1-201ENST00000571429 661 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX2-2O95096 AL096865.1-201ENST00000606796 927 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 AC103702.1-201ENST00000548801 2630 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 AL596257.1-201ENST00000641463 2694 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 TNRC18P2-201ENST00000417666 2714 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 SLC7A15P-201ENST00000424028 1363 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-2O95096 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 DRD5P1-201ENST00000456605 1438 ntBASIC14.3□□□□□ -0.12
NKX2-2O95096 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-2O95096 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX2-2O95096 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-2O95096 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-2O95096 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-2O95096 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NKX2-2O95096 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 AP000845.1-201ENST00000581677 2131 ntBASIC14.29□□□□□ -0.12
NKX2-2O95096 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
NKX2-2O95096 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 FAM207CP-201ENST00000443486 507 ntBASIC14.29□□□□□ -0.12
NKX2-2O95096 BCRP1-201ENST00000444246 691 ntBASIC14.29□□□□□ -0.12
NKX2-2O95096 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 AC026410.3-201ENST00000514280 936 ntBASIC14.29□□□□□ -0.12
NKX2-2O95096 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX2-2O95096 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX2-2O95096 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.29□□□□□ -0.12
NKX2-2O95096 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.29□□□□□ -0.12
NKX2-2O95096 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.29□□□□□ -0.12
NKX2-2O95096 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NKX2-2O95096 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NKX2-2O95096 AL662799.1-202ENST00000614205 422 ntBASIC14.29□□□□□ -0.12
NKX2-2O95096 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX2-2O95096 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NKX2-2O95096 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NKX2-2O95096 REXO1L4P-201ENST00000605109 1937 ntBASIC14.29□□□□□ -0.12
NKX2-2O95096 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-2O95096 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms