Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 AL607033.1-201ENST00000623900 1599 ntBASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 AC004870.1-201ENST00000315132 882 ntBASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 HNRNPUP1-201ENST00000554987 333 ntBASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 AL513190.1-201ENST00000621254 727 ntBASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 GRK6P1-201ENST00000400595 1711 ntBASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAV5A0A0B4J249 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 AC104109.2-201ENST00000602919 1418 ntBASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 AL139010.1-201ENST00000454878 894 ntBASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 AC112191.1-201ENST00000523689 701 ntBASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms