Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA6Q9Y5G7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 TSPY9P-201ENST00000440215 945 ntBASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 TSPY11P-201ENST00000442607 1045 ntBASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA6Q9Y5G7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGA6Q9Y5G7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGA6Q9Y5G7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
PCDHGA6Q9Y5G7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA6Q9Y5G7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHGA6Q9Y5G7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGA6Q9Y5G7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA6Q9Y5G7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGA6Q9Y5G7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA6Q9Y5G7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA6Q9Y5G7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA6Q9Y5G7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHGA6Q9Y5G7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA6Q9Y5G7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHGA6Q9Y5G7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGA6Q9Y5G7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA6Q9Y5G7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.26■■□□□ 1.15
PCDHGA6Q9Y5G7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA6Q9Y5G7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGA6Q9Y5G7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA6Q9Y5G7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA6Q9Y5G7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA6Q9Y5G7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA6Q9Y5G7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGA6Q9Y5G7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA6Q9Y5G7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA6Q9Y5G7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGA6Q9Y5G7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA6Q9Y5G7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA6Q9Y5G7 AL139125.2-201ENST00000623134 1869 ntBASIC22.24■■□□□ 1.15
PCDHGA6Q9Y5G7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA6Q9Y5G7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA6Q9Y5G7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA6Q9Y5G7 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHGA6Q9Y5G7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA6Q9Y5G7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA6Q9Y5G7 AC022211.4-201ENST00000625094 2161 ntBASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 AC138932.3-201ENST00000567634 1902 ntBASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA6Q9Y5G7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA6Q9Y5G7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA6Q9Y5G7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDHGA6Q9Y5G7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.22■■□□□ 1.15
PCDHGA6Q9Y5G7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA6Q9Y5G7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA6Q9Y5G7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHGA6Q9Y5G7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA6Q9Y5G7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDHGA6Q9Y5G7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA6Q9Y5G7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHGA6Q9Y5G7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDHGA6Q9Y5G7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHGA6Q9Y5G7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA6Q9Y5G7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PCDHGA6Q9Y5G7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHGA6Q9Y5G7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHGA6Q9Y5G7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
PCDHGA6Q9Y5G7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHGA6Q9Y5G7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGA6Q9Y5G7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGA6Q9Y5G7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.19■■□□□ 1.14
PCDHGA6Q9Y5G7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGA6Q9Y5G7 AC010997.5-201ENST00000609182 354 ntBASIC22.19■■□□□ 1.14
PCDHGA6Q9Y5G7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGA6Q9Y5G7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PCDHGA6Q9Y5G7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA6Q9Y5G7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA6Q9Y5G7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA6Q9Y5G7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms