Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHB7Q9Y5E2 AC004448.1-201ENST00000458332 883 ntBASIC25.21■■□□□ 1.63
PCDHB7Q9Y5E2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDHB7Q9Y5E2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHB7Q9Y5E2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.63
PCDHB7Q9Y5E2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHB7Q9Y5E2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHB7Q9Y5E2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHB7Q9Y5E2 UNC93B3-201ENST00000308076 687 ntBASIC25.2■■□□□ 1.62
PCDHB7Q9Y5E2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
PCDHB7Q9Y5E2 SRD5A1P1-201ENST00000442297 786 ntBASIC25.2■■□□□ 1.62
PCDHB7Q9Y5E2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.2■■□□□ 1.62
PCDHB7Q9Y5E2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
PCDHB7Q9Y5E2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
PCDHB7Q9Y5E2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHB7Q9Y5E2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHB7Q9Y5E2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
PCDHB7Q9Y5E2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
PCDHB7Q9Y5E2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHB7Q9Y5E2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB7Q9Y5E2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB7Q9Y5E2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 AC092803.2-201ENST00000564287 1899 ntBASIC25.17■■□□□ 1.62
PCDHB7Q9Y5E2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB7Q9Y5E2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB7Q9Y5E2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.16■■□□□ 1.62
PCDHB7Q9Y5E2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PCDHB7Q9Y5E2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB7Q9Y5E2 AC142381.2-201ENST00000566120 298 ntBASIC25.16■■□□□ 1.62
PCDHB7Q9Y5E2 AL136162.1-201ENST00000607711 1078 ntBASIC25.16■■□□□ 1.62
PCDHB7Q9Y5E2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHB7Q9Y5E2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHB7Q9Y5E2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHB7Q9Y5E2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHB7Q9Y5E2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHB7Q9Y5E2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHB7Q9Y5E2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHB7Q9Y5E2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHB7Q9Y5E2 AC005703.6-201ENST00000623265 1329 ntBASIC25.13■■□□□ 1.61
PCDHB7Q9Y5E2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
PCDHB7Q9Y5E2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHB7Q9Y5E2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDHB7Q9Y5E2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHB7Q9Y5E2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHB7Q9Y5E2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDHB7Q9Y5E2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHB7Q9Y5E2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB7Q9Y5E2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
PCDHB7Q9Y5E2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHB7Q9Y5E2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDHB7Q9Y5E2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB7Q9Y5E2 AC135279.3-201ENST00000610945 1311 ntBASIC25.12■■□□□ 1.61
PCDHB7Q9Y5E2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
PCDHB7Q9Y5E2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PCDHB7Q9Y5E2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB7Q9Y5E2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB7Q9Y5E2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB7Q9Y5E2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHB7Q9Y5E2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB7Q9Y5E2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
PCDHB7Q9Y5E2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHB7Q9Y5E2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHB7Q9Y5E2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.1■■□□□ 1.61
PCDHB7Q9Y5E2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHB7Q9Y5E2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHB7Q9Y5E2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB7Q9Y5E2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB7Q9Y5E2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB7Q9Y5E2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.09■■□□□ 1.61
PCDHB7Q9Y5E2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB7Q9Y5E2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.09■■□□□ 1.61
PCDHB7Q9Y5E2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHB7Q9Y5E2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB7Q9Y5E2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB7Q9Y5E2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PCDHB7Q9Y5E2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB7Q9Y5E2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB7Q9Y5E2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
PCDHB7Q9Y5E2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB7Q9Y5E2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB7Q9Y5E2 ZNRF2P3-201ENST00000424200 374 ntBASIC25.08■■□□□ 1.61
PCDHB7Q9Y5E2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.08■■□□□ 1.61
PCDHB7Q9Y5E2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB7Q9Y5E2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHB7Q9Y5E2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB7Q9Y5E2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHB7Q9Y5E2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.07■■□□□ 1.6
PCDHB7Q9Y5E2 AC024257.2-201ENST00000549699 147 ntBASIC25.07■■□□□ 1.6
PCDHB7Q9Y5E2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
PCDHB7Q9Y5E2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB7Q9Y5E2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms