Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TSC22D4Q9Y3Q8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TSC22D4Q9Y3Q8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 LINC00543-201ENST00000567234 1845 ntBASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TSC22D4Q9Y3Q8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 AC090877.2-201ENST00000558441 1738 ntBASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 AC022616.5-201ENST00000518796 181 ntBASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TSC22D4Q9Y3Q8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
TSC22D4Q9Y3Q8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
TSC22D4Q9Y3Q8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TSC22D4Q9Y3Q8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
TSC22D4Q9Y3Q8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TSC22D4Q9Y3Q8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TSC22D4Q9Y3Q8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TSC22D4Q9Y3Q8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TSC22D4Q9Y3Q8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TSC22D4Q9Y3Q8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.38■■□□□ 1.17
TSC22D4Q9Y3Q8 TSPY13P-201ENST00000338964 914 ntBASIC22.38■■□□□ 1.17
TSC22D4Q9Y3Q8 DUX4L18-201ENST00000553347 1267 ntBASIC22.38■■□□□ 1.17
TSC22D4Q9Y3Q8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TSC22D4Q9Y3Q8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TSC22D4Q9Y3Q8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TSC22D4Q9Y3Q8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TSC22D4Q9Y3Q8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 AC139795.1-202ENST00000500444 432 ntBASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.37■■□□□ 1.17
TSC22D4Q9Y3Q8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 LINC01124-201ENST00000409786 2117 ntBASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TSC22D4Q9Y3Q8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 AC011551.1-201ENST00000614101 683 ntBASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 AC012354.3-201ENST00000623734 483 ntBASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 HLA-L-211ENST00000482052 1765 ntBASIC22.35■■□□□ 1.17
TSC22D4Q9Y3Q8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TSC22D4Q9Y3Q8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TSC22D4Q9Y3Q8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
TSC22D4Q9Y3Q8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TSC22D4Q9Y3Q8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TSC22D4Q9Y3Q8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TSC22D4Q9Y3Q8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TSC22D4Q9Y3Q8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TSC22D4Q9Y3Q8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TSC22D4Q9Y3Q8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TSC22D4Q9Y3Q8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.33■■□□□ 1.17
TSC22D4Q9Y3Q8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.33■■□□□ 1.17
TSC22D4Q9Y3Q8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TSC22D4Q9Y3Q8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
TSC22D4Q9Y3Q8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.33■■□□□ 1.17
TSC22D4Q9Y3Q8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
TSC22D4Q9Y3Q8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TSC22D4Q9Y3Q8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TSC22D4Q9Y3Q8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
TSC22D4Q9Y3Q8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.33■■□□□ 1.16
TSC22D4Q9Y3Q8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TSC22D4Q9Y3Q8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TSC22D4Q9Y3Q8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms