Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPUSD1Q9UJJ7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 KRT125P-201ENST00000546827 989 ntBASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 AL139125.2-201ENST00000623134 1869 ntBASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPUSD1Q9UJJ7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 AC135731.1-201ENST00000569415 2548 ntBASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.27■□□□□ 0.68
RPUSD1Q9UJJ7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
RPUSD1Q9UJJ7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.27■□□□□ 0.67
RPUSD1Q9UJJ7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RPUSD1Q9UJJ7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPUSD1Q9UJJ7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPUSD1Q9UJJ7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.26■□□□□ 0.67
RPUSD1Q9UJJ7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPUSD1Q9UJJ7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPUSD1Q9UJJ7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPUSD1Q9UJJ7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPUSD1Q9UJJ7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPUSD1Q9UJJ7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPUSD1Q9UJJ7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.25■□□□□ 0.67
RPUSD1Q9UJJ7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPUSD1Q9UJJ7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPUSD1Q9UJJ7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.25■□□□□ 0.67
RPUSD1Q9UJJ7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.25■□□□□ 0.67
RPUSD1Q9UJJ7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPUSD1Q9UJJ7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPUSD1Q9UJJ7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 AC021242.3-201ENST00000607598 1377 ntBASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.24■□□□□ 0.67
RPUSD1Q9UJJ7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 MIR4787-201ENST00000607364 84 ntBASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 AF131216.4-201ENST00000638924 1588 ntBASIC19.23■□□□□ 0.67
RPUSD1Q9UJJ7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPUSD1Q9UJJ7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPUSD1Q9UJJ7 GUSBP5-201ENST00000418136 578 ntBASIC19.22■□□□□ 0.67
RPUSD1Q9UJJ7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.22■□□□□ 0.67
RPUSD1Q9UJJ7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.22■□□□□ 0.67
RPUSD1Q9UJJ7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.21■□□□□ 0.67
RPUSD1Q9UJJ7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPUSD1Q9UJJ7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPUSD1Q9UJJ7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPUSD1Q9UJJ7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPUSD1Q9UJJ7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.2■□□□□ 0.66
RPUSD1Q9UJJ7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms